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Fwd: PNAS Early Edition for 25 May 2016

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From: <pnas-mailer@alerts.highwire.org>
Date: Thu, May 26, 2016 at 2:13 AM
Subject: PNAS Early Edition for 25 May 2016
To: pascal.alter@gmail.com


PNAS    Proceedings of the National Academy of Sciences
Letters (Online Only)
Reply to Alberti: Are in vitro folding experiments relevant in vivo?
Pavel I. Zhuravlev, Michael Hinczewski, Shaon Chakrabarti, Susan Marqusee, and D. Thirumalai
Reply to Einarsson: The computational power of parallel network exploration with many bioagents
Dan V. Nicolau Jr., Mercy Lard, Till Korten, Falco C. M. J. M. van Delft, Malin Persson, Elina Bengtsson, Alf Månsson, Stefan Diez, Heiner Linke, and Dan V. Nicolau
Reply to Svensson: Quantum violations of the pigeonhole principle
Yakir Aharonov, Fabrizio Colombo, Sandu Popescu, Irene Sabadini, Daniele C. Struppa, and Jeff Tollaksen

QnAs

Commentaries
Are there prions in plants?
Yury O. Chernoff

Physical Sciences
Applied Physical Sciences
Atomic-scale control of magnetic anisotropy via novel spin–orbit coupling effect in La2/3Sr1/3MnO3/SrIrO3 superlattices Open Access Article
Di Yi, Jian Liu, Shang-Lin Hsu, Lipeng Zhang, Yongseong Choi, Jong-Woo Kim, Zuhuang Chen, James D. Clarkson, Claudy R. Serrao, Elke Arenholz, Philip J. Ryan, Haixuan Xu, Robert J. Birgeneau, and Ramamoorthy Ramesh
Chemistry
Antifreeze proteins govern the precipitation of trehalose in a freezing-avoiding insect at low temperature
Xin Wen, Sen Wang, John G. Duman, Josh Fnu Arifin, Vonny Juwita, William A. Goddard III, Alejandra Rios, Fan Liu, Soo-Kyung Kim, Ravinder Abrol, Arthur L. DeVries, and Lawrence M. Henling
Multiensemble Markov models of molecular thermodynamics and kinetics Open Access Article
Hao Wu, Fabian Paul, Christoph Wehmeyer, and Frank Noé
Proton–hydride tautomerism in hydrogen evolution catalysis
Luis M. Aguirre Quintana, Samantha I. Johnson, Sydney L. Corona, Walther Villatoro, William A. Goddard III, Michael K. Takase, David G. VanderVelde, Jay R. Winkler, Harry B. Gray, and James D. Blakemore
Enzymatically enhanced collisions on ultramicroelectrodes for specific and rapid detection of individual viruses
Jeffrey E. Dick, Adam T. Hilterbrand, Lauren M. Strawsine, Jason W. Upton, and Allen J. Bard
Computer Sciences
Engineering
Molecular tandem repeat strategy for elucidating mechanical properties of high-strength proteins
Huihun Jung, Abdon Pena-Francesch, Alham Saadat, Aswathy Sebastian, Dong Hwan Kim, Reginald F. Hamilton, Istvan Albert, Benjamin D. Allen, and Melik C. Demirel
Nanospherical arabinogalactan proteins are a key component of the high-strength adhesive secreted by English ivy
Yujian Huang, Yongzhong Wang, Li Tan, Leming Sun, Jennifer Petrosino, Mei-Zhen Cui, Feng Hao, and Mingjun Zhang
Environmental Sciences
Mobile phone data highlights the role of mass gatherings in the spreading of cholera outbreaks Open Access Article
Flavio Finger, Tina Genolet, Lorenzo Mari, Guillaume Constantin de Magny, Noël Magloire Manga, Andrea Rinaldo, and Enrico Bertuzzo
Physics
Enhanced thermopower in ZnO two-dimensional electron gas
Sunao Shimizu, Mohammad Saeed Bahramy, Takahiko Iizuka, Shimpei Ono, Kazumoto Miwa, Yoshinori Tokura, and Yoshihiro Iwasa
Lassoing saddle splay and the geometrical control of topological defects
Lisa Tran, Maxim O. Lavrentovich, Daniel A. Beller, Ningwei Li, Kathleen J. Stebe, and Randall D. Kamien
Search for supersolidity in solid 4He using multiple-mode torsional oscillators Open Access Article
Anna Eyal, Xiao Mi, Artem V. Talanov, and John D. Reppy
When a local Hamiltonian must be frustration-free
Or Sattath, Siddhardh C. Morampudi, Chris R. Laumann, and Roderich Moessner
Statistics
Probabilistic population projections with migration uncertainty Open Access Article
Jonathan J. Azose, Hana Ševčíková, and Adrian E. Raftery

Social Sciences
Anthropology
Millennial-scale sustainability of the Chesapeake Bay Native American oyster fishery
Torben C. Rick, Leslie A. Reeder-Myers, Courtney A. Hofman, Denise Breitburg, Rowan Lockwood, Gregory Henkes, Lisa Kellogg, Darrin Lowery, Mark W. Luckenbach, Roger Mann, Matthew B. Ogburn, Melissa Southworth, John Wah, James Wesson, and Anson H. Hines
Revealing a 5,000-y-old beer recipe in China
Jiajing Wang, Li Liu, Terry Ball, Linjie Yu, Yuanqing Li, and Fulai Xing
Psychological and Cognitive Sciences
Extraordinary intelligence and the care of infants
Steven T. Piantadosi and Celeste Kidd
Contextual sensitivity in scientific reproducibility
Jay J. Van Bavel, Peter Mende-Siedlecki, William J. Brady, and Diego A. Reinero
Social Sciences
Probabilistic population projections with migration uncertainty Open Access Article
Jonathan J. Azose, Hana Ševčíková, and Adrian E. Raftery
Sustainability Science
Social networks and environmental outcomes Open Access Article
Michele L. Barnes, John Lynham, Kolter Kalberg, and PingSun Leung

Biological Sciences
Anthropology
Neonatal postcrania from Mezmaiskaya, Russia, and Le Moustier, France, and the development of Neandertal body form Open Access Article
Timothy D. Weaver, Hélène Coqueugniot, Liubov V. Golovanova, Vladimir B. Doronichev, Bruno Maureille, and Jean-Jacques Hublin
Applied Biological Sciences
Molecular tandem repeat strategy for elucidating mechanical properties of high-strength proteins
Huihun Jung, Abdon Pena-Francesch, Alham Saadat, Aswathy Sebastian, Dong Hwan Kim, Reginald F. Hamilton, Istvan Albert, Benjamin D. Allen, and Melik C. Demirel
Biochemistry
Cellular folding pathway of a metastable serpin
Kshama Chandrasekhar, Haiping Ke, Ning Wang, Theresa Goodwin, Lila M. Gierasch, Anne Gershenson, and Daniel N. Hebert
Biophysics and Computational Biology
Multiensemble Markov models of molecular thermodynamics and kinetics Open Access Article
Hao Wu, Fabian Paul, Christoph Wehmeyer, and Frank Noé
New paradigm to assess brain cell morphology by diffusion-weighted MR spectroscopy in vivo Open Access Article
Marco Palombo, Clémence Ligneul, Chloé Najac, Juliette Le Douce, Julien Flament, Carole Escartin, Philippe Hantraye, Emmanuel Brouillet, Gilles Bonvento, and Julien Valette
β1-subunit–induced structural rearrangements of the Ca2+- and voltage-activated K+ (BK) channel
Juan P. Castillo, Jorge E. Sánchez-Rodríguez, H. Clark Hyde, Cristian A. Zaelzer, Daniel Aguayo, Romina V. Sepúlveda, Louis Y. P. Luk, Stephen B. H. Kent, Fernando D. Gonzalez-Nilo, Francisco Bezanilla, and Ramón Latorre
Cell Biology
Aurora kinase-induced phosphorylation excludes transcription factor RUNX from the chromatin to facilitate proper mitotic progression
Linda Shyue Huey Chuang, Jian Ming Khor, Soak Kuan Lai, Shubham Garg, Vaidehi Krishnan, Cheng-Gee Koh, Sang Hyun Lee, and Yoshiaki Ito
Ecology
Antifreeze proteins govern the precipitation of trehalose in a freezing-avoiding insect at low temperature
Xin Wen, Sen Wang, John G. Duman, Josh Fnu Arifin, Vonny Juwita, William A. Goddard III, Alejandra Rios, Fan Liu, Soo-Kyung Kim, Ravinder Abrol, Arthur L. DeVries, and Lawrence M. Henling
Root exudates drive interspecific facilitation by enhancing nodulation and N2 fixation Open Access Article
Bai Li, Yu-Ying Li, Hua-Mao Wu, Fang-Fang Zhang, Chun-Jie Li, Xue-Xian Li, Hans Lambers, and Long Li
Evolution
Networks of highly branched stigmarian rootlets developed on the first giant trees Open Access Article
Alexander J. Hetherington, Christopher M. Berry, and Liam Dolan
Genetics
Spliceosomal intronogenesis
Sujin Lee and Scott W. Stevens
Immunology and Inflammation
Transcriptional regulator Bhlhe40 works as a cofactor of T-bet in the regulation of IFN-γ production in iNKT cells
Masatoshi Kanda, Hiroyuki Yamanaka, Satoshi Kojo, Yuu Usui, Hiroaki Honda, Yusuke Sotomaru, Michishige Harada, Masaru Taniguchi, Nao Suzuki, Tatsuya Atsumi, Haruka Wada, Muhammad Baghdadi, and Ken-ichiro Seino
CYP450-derived oxylipins mediate inflammatory resolution Open Access Article
Derek W. Gilroy, Matthew L. Edin, Roel P. H. De Maeyer, Jonas Bystrom, Justine Newson, Fred B. Lih, Melanie Stables, Darryl C. Zeldin, and David Bishop-Bailey
Developmental cell death programs license cytotoxic cells to eliminate histocompatible partners
Daniel M. Corey, Benyamin Rosental, Mark Kowarsky, Rahul Sinha, Katherine J. Ishizuka, Karla J. Palmeri, Stephen R. Quake, Ayelet Voskoboynik, and Irving L. Weissman
MerTK cleavage limits proresolving mediator biosynthesis and exacerbates tissue inflammation
Bishuang Cai, Edward B. Thorp, Amanda C. Doran, Manikandan Subramanian, Brian E. Sansbury, Chyuan-Sheng Lin, Matthew Spite, Gabrielle Fredman, and Ira Tabas
Medical Sciences
Growth hormone is permissive for neoplastic colon growth
Vera Chesnokova, Svetlana Zonis, Cuiqi Zhou, Maria Victoria Recouvreux, Anat Ben-Shlomo, Takako Araki, Robert Barrett, Michael Workman, Kolja Wawrowsky, Vladimir A. Ljubimov, Magdalena Uhart, and Shlomo Melmed
Microbiology
Coxiella burnetii effector CvpB modulates phosphoinositide metabolism for optimal vacuole development
Eric Martinez, Julie Allombert, Franck Cantet, Anissa Lakhani, Naresh Yandrapalli, Aymeric Neyret, Isobel H. Norville, Cyril Favard, Delphine Muriaux, and Matteo Bonazzi
VEX1 controls the allelic exclusion required for antigenic variation in trypanosomes Open Access Article
Lucy Glover, Sebastian Hutchinson, Sam Alsford, and David Horn
Single-cell twitching chemotaxis in developing biofilms
Nuno M. Oliveira, Kevin R. Foster, and William M. Durham
Enzymatically enhanced collisions on ultramicroelectrodes for specific and rapid detection of individual viruses
Jeffrey E. Dick, Adam T. Hilterbrand, Lauren M. Strawsine, Jason W. Upton, and Allen J. Bard
Bacterial β-Kdo glycosyltransferases represent a new glycosyltransferase family (GT99)
Olga G. Ovchinnikova, Evan Mallette, Akihiko Koizumi, Todd L. Lowary, Matthew S. Kimber, and Chris Whitfield
Neuroscience
nArgBP2 regulates excitatory synapse formation by controlling dendritic spine morphology
Sang-Eun Lee, Yoonju Kim, Jeong-Kyu Han, Hoyong Park, Unghwi Lee, Myeongsu Na, Soomin Jeong, ChiHye Chung, Gianluca Cestra, and Sunghoe Chang
Analysis of complex neural circuits with nonlinear multidimensional hidden state models
Alexander Friedman, Joshua F. Slocum, Danil Tyulmankov, Leif G. Gibb, Alex Altshuler, Suthee Ruangwises, Qinru Shi, Sebastian E. Toro Arana, Dirk W. Beck, Jacquelyn E. C. Sholes, and Ann M. Graybiel
Brain aerobic glycolysis and motor adaptation learning Open Access Article
Benjamin J. Shannon, Sanjeev Neil Vaishnavi, Andrei G. Vlassenko, Joshua S. Shimony, Jerrel Rutlin, and Marcus E. Raichle
Osmoregulatory inositol transporter SMIT1 modulates electrical activity by adjusting PI(4,5)P2 levels
Gucan Dai, Haijie Yu, Martin Kruse, Alexis Traynor-Kaplan, and Bertil Hille
Medial septal GABAergic projection neurons promote object exploration behavior and type 2 theta rhythm Open Access Article
Gireesh Gangadharan, Jonghan Shin, Seong-Wook Kim, Angela Kim, Afshin Paydar, Duk-Soo Kim, Taisuke Miyazaki, Masahiko Watanabe, Yuchio Yanagawa, Jinhyun Kim, Yeon-Soo Kim, Daesoo Kim, and Hee-Sup Shin
Combinatorial effects of odorants on mouse behavior Open Access Article
Luis R. Saraiva, Kunio Kondoh, Xiaolan Ye, Kyoung-hye Yoon, Marcus Hernandez, and Linda B. Buck
Physiology
Neuronal energy-sensing pathway promotes energy balance by modulating disease tolerance
Run Shen, Biao Wang, Maria G. Giribaldi, Janelle Ayres, John B. Thomas, and Marc Montminy
Plant Biology
Chloroplast FBPase and SBPase are thioredoxin-linked enzymes with similar architecture but different evolutionary histories
Desirée D. Gütle, Thomas Roret, Stefanie J. Müller, Jérémy Couturier, Stéphane D. Lemaire, Arnaud Hecker, Tiphaine Dhalleine, Bob B. Buchanan, Ralf Reski, Oliver Einsle, and Jean-Pierre Jacquot
Auxin-dependent compositional change in Mediator in ARF7- and ARF19-mediated transcription Open Access Article
Jun Ito, Hidehiro Fukaki, Makoto Onoda, Lin Li, Chuanyou Li, Masao Tasaka, and Masahiko Furutani
Sustainability Science
Millennial-scale sustainability of the Chesapeake Bay Native American oyster fishery
Torben C. Rick, Leslie A. Reeder-Myers, Courtney A. Hofman, Denise Breitburg, Rowan Lockwood, Gregory Henkes, Lisa Kellogg, Darrin Lowery, Mark W. Luckenbach, Roger Mann, Matthew B. Ogburn, Melissa Southworth, John Wah, James Wesson, and Anson H. Hines

Correction

SI Correction
Open Access
From the Cover
Inaugural Article
Classic
Cozzarelli Prize Winner
Front Matter

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Copyright © 2016 by the National Academy of Sciences

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