wtorek, 29 marca 2016

Fwd: PNAS Table of Contents for 29 March 2016; Vol. 113, No. 13

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Subject: PNAS Table of Contents for 29 March 2016; Vol. 113, No. 13
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PNAS    Proceedings of the National Academy of Sciences
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This Week in PNAS

Letters (Online Only)
Polygyny and child health revisited
Matthias Rieger and Natascha Wagner
Reply to Rieger and Wagner: Context matters when studying purportedly harmful cultural practices
David W. Lawson, Susan James, Esther Ngadaya, Bernard Ngowi, Sayoki G. M. Mfinanga, and Monique Borgerhoff Mulder
Reply to Szuwalski: Recognizing ecological income inequality in the ocean
Gregory L. Britten, Michael Dowd, and Boris Worm

Opinion
Leading scientists discuss current issues.

Retrospective

Commentaries
Tuning in by tuning out distractions
Kirsten C. S. Adam and Edward K. Vogel

PNAS Plus Significance Statements
Brief statements written by the authors about the significance of their papers.

Physical Sciences
Applied Physical Sciences
Ultrahigh-pressure polyamorphism in GeO2 glass with coordination number >6
Yoshio Kono, Curtis Kenney-Benson, Daijo Ikuta, Yuki Shibazaki, Yanbin Wang, and Guoyin Shen
Breaking the diffraction limit of light-sheet fluorescence microscopy by RESOLFT Open Access Article From the Cover
Patrick Hoyer, Gustavo de Medeiros, Bálint Balázs, Nils Norlin, Christina Besir, Janina Hanne, Hans-Georg Kräusslich, Johann Engelhardt, Steffen J. Sahl, Stefan W. Hell, and Lars Hufnagel
Snapshot of sequential SNARE assembling states between membranes shows that N-terminal transient assembly initializes fusion
Yong Jian Wang, Feng Li, Nicolas Rodriguez, Xavier Lafosse, Christine Gourier, Eric Perez, and Frederic Pincet
Discovery of fairy circles in Australia supports self-organization theory
Stephan Getzin, Hezi Yizhaq, Bronwyn Bell, Todd E. Erickson, Anthony C. Postle, Itzhak Katra, Omer Tzuk, Yuval R. Zelnik, Kerstin Wiegand, Thorsten Wiegand, and Ehud Meron
Earth, Atmospheric, and Planetary Sciences
New tyrannosaur from the mid-Cretaceous of Uzbekistan clarifies evolution of giant body sizes and advanced senses in tyrant dinosaurs
Stephen L. Brusatte, Alexander Averianov, Hans-Dieter Sues, Amy Muir, and Ian B. Butler
Antarctic ice sheet sensitivity to atmospheric CO2 variations in the early to mid-Miocene Open Access Article
Richard Levy, David Harwood, Fabio Florindo, Francesca Sangiorgi, Robert Tripati, Hilmar von Eynatten, Edward Gasson, Gerhard Kuhn, Aradhna Tripati, Robert DeConto, Christopher Fielding, Brad Field, Nicholas Golledge, Robert McKay, Timothy Naish, Matthew Olney, David Pollard, Stefan Schouten, Franco Talarico, Sophie Warny, Veronica Willmott, Gary Acton, Kurt Panter, Timothy Paulsen, Marco Taviani, and SMS Science Team
Dynamic Antarctic ice sheet during the early to mid-Miocene From the Cover
Edward Gasson, Robert M. DeConto, David Pollard, and Richard H. Levy
Carbon isotopes characterize rapid changes in atmospheric carbon dioxide during the last deglaciation From the Cover
Thomas K. Bauska, Daniel Baggenstos, Edward J. Brook, Alan C. Mix, Shaun A. Marcott, Vasilii V. Petrenko, Hinrich Schaefer, Jeffrey P. Severinghaus, and James E. Lee
Engineering
Breaking temporal symmetries for emission and absorption
Yakir Hadad, Jason C. Soric, and Andrea Alu
Environmental Sciences
Physics
Hierarchy and extremes in selections from pools of randomized proteins
Sébastien Boyer, Dipanwita Biswas, Ananda Kumar Soshee, Natale Scaramozzino, Clément Nizak, and Olivier Rivoire

Social Sciences
Economic Sciences
Impacts of classifying New York City students as overweight
Douglas Almond, Ajin Lee, and Amy Ellen Schwartz
Psychological and Cognitive Sciences
Infants ask for help when they know they don't know Open Access Article
Louise Goupil, Margaux Romand-Monnier, and Sid Kouider

Biological Sciences
Applied Biological Sciences
Optogenetic skeletal muscle-powered adaptive biological machines
Ritu Raman, Caroline Cvetkovic, Sebastien G. M. Uzel, Randall J. Platt, Parijat Sengupta, Roger D. Kamm, and Rashid Bashir
Biochemistry
Acetyl-CoA carboxylase inhibition by ND-630 reduces hepatic steatosis, improves insulin sensitivity, and modulates dyslipidemia in rats Open Access Article
Geraldine Harriman, Jeremy Greenwood, Sathesh Bhat, Xinyi Huang, Ruiying Wang, Debamita Paul, Liang Tong, Asish K. Saha, William F. Westlin, Rosana Kapeller, and H. James Harwood Jr.
TFE and Spt4/5 open and close the RNA polymerase clamp during the transcription cycle Open Access Article
Sarah Schulz, Andreas Gietl, Katherine Smollett, Philip Tinnefeld, Finn Werner, and Dina Grohmann
Inositol hexakisphosphate (IP6) generated by IP5K mediates cullin-COP9 signalosome interactions and CRL function
Paul C. Scherer, Yan Ding, Zhiqing Liu, Jing Xu, Haibin Mao, James C. Barrow, Ning Wei, Ning Zheng, Solomon H. Snyder, and Feng Rao
Molecular basis for inhibition of AcrB multidrug efflux pump by novel and powerful pyranopyridine derivatives
Hanno Sjuts, Attilio V. Vargiu, Steven M. Kwasny, Son T. Nguyen, Hong-Suk Kim, Xiaoyuan Ding, Alina R. Ornik, Paolo Ruggerone, Terry L. Bowlin, Hiroshi Nikaido, Klaas M. Pos, and Timothy J. Opperman
BRCA2 regulates DMC1-mediated recombination through the BRC repeats Open Access Article
Juan S. Martinez, Catharina von Nicolai, Taeho Kim, Åsa Ehlén, Alexander V. Mazin, Stephen C. Kowalczykowski, and Aura Carreira
Biosynthetic investigation of phomopsins reveals a widespread pathway for ribosomal natural products in Ascomycetes
Wei Ding, Wan-Qiu Liu, Youli Jia, Yongzhen Li, Wilfred A. van der Donk, and Qi Zhang
Inhibition of SCF ubiquitin ligases by engineered ubiquitin variants that target the Cul1 binding site on the Skp1–F-box interface Open Access Article
Maryna Gorelik, Stephen Orlicky, Maria A. Sartori, Xiaojing Tang, Edyta Marcon, Igor Kurinov, Jack F. Greenblatt, Mike Tyers, Jason Moffat, Frank Sicheri, and Sachdev S. Sidhu
Biophysics and Computational Biology
Identification of tissue-specific cell death using methylation patterns of circulating DNA
Roni Lehmann-Werman, Daniel Neiman, Hai Zemmour, Joshua Moss, Judith Magenheim, Adi Vaknin-Dembinsky, Sten Rubertsson, Bengt Nellgård, Kaj Blennow, Henrik Zetterberg, Kirsty Spalding, Michael J. Haller, Clive H. Wasserfall, Desmond A. Schatz, Carla J. Greenbaum, Craig Dorrell, Markus Grompe, Aviad Zick, Ayala Hubert, Myriam Maoz, Volker Fendrich, Detlef K. Bartsch, Talia Golan, Shmuel A. Ben Sasson, Gideon Zamir, Aharon Razin, Howard Cedar, A. M. James Shapiro, Benjamin Glaser, Ruth Shemer, and Yuval Dor
Identifying genetic modulators of the connectivity between transcription factors and their transcriptional targets Open Access Article
Mina Fazlollahi, Ivor Muroff, Eunjee Lee, Helen C. Causton, and Harmen J. Bussemaker
Force-producing ADP state of myosin bound to actin Open Access Article
Sarah F. Wulf, Virginie Ropars, Setsuko Fujita-Becker, Marco Oster, Goetz Hofhaus, Leonardo G. Trabuco, Olena Pylypenko, H. Lee Sweeney, Anne M. Houdusse, and Rasmus R. Schröder
Recognition of the disordered p53 transactivation domain by the transcriptional adapter zinc finger domains of CREB-binding protein
Alexander S. Krois, Josephine C. Ferreon, Maria A. Martinez-Yamout, H. Jane Dyson, and Peter E. Wright
Hierarchy and extremes in selections from pools of randomized proteins
Sébastien Boyer, Dipanwita Biswas, Ananda Kumar Soshee, Natale Scaramozzino, Clément Nizak, and Olivier Rivoire
Snapshot of sequential SNARE assembling states between membranes shows that N-terminal transient assembly initializes fusion
Yong Jian Wang, Feng Li, Nicolas Rodriguez, Xavier Lafosse, Christine Gourier, Eric Perez, and Frederic Pincet
Intramolecular allosteric communication in dopamine D2 receptor revealed by evolutionary amino acid covariation Open Access Article
Yun-Min Sung, Angela D. Wilkins, Gustavo J. Rodriguez, Theodore G. Wensel, and Olivier Lichtarge
Cell Biology
A RhoA and Rnd3 cycle regulates actin reassembly during membrane blebbing
Kana Aoki, Fumiyo Maeda, Tomoya Nagasako, Yuki Mochizuki, Seiichi Uchida, and Junichi Ikenouchi
Developmental Biology
Sp5 and Sp8 recruit β-catenin and Tcf1-Lef1 to select enhancers to activate Wnt target gene transcription
Mark W. Kennedy, Ravindra B. Chalamalasetty, Sara Thomas, Robert J. Garriock, Parthav Jailwala, and Terry P. Yamaguchi
Ecology
Discovery of fairy circles in Australia supports self-organization theory
Stephan Getzin, Hezi Yizhaq, Bronwyn Bell, Todd E. Erickson, Anthony C. Postle, Itzhak Katra, Omer Tzuk, Yuval R. Zelnik, Kerstin Wiegand, Thorsten Wiegand, and Ehud Meron
Biotic homogenization can decrease landscape-scale forest multifunctionality
Fons van der Plas, Pete Manning, Santiago Soliveres, Eric Allan, Michael Scherer-Lorenzen, Kris Verheyen, Christian Wirth, Miguel A. Zavala, Evy Ampoorter, Lander Baeten, Luc Barbaro, Jürgen Bauhus, Raquel Benavides, Adam Benneter, Damien Bonal, Olivier Bouriaud, Helge Bruelheide, Filippo Bussotti, Monique Carnol, Bastien Castagneyrol, Yohan Charbonnier, David Anthony Coomes, Andrea Coppi, Cristina C. Bestias, Seid Muhie Dawud, Hans De Wandeler, Timo Domisch, Leena Finér, Arthur Gessler, André Granier, Charlotte Grossiord, Virginie Guyot, Stephan Hättenschwiler, Hervé Jactel, Bogdan Jaroszewicz, François-xavier Joly, Tommaso Jucker, Julia Koricheva, Harriet Milligan, Sandra Mueller, Bart Muys, Diem Nguyen, Martina Pollastrini, Sophia Ratcliffe, Karsten Raulund-Rasmussen, Federico Selvi, Jan Stenlid, Fernando Valladares, Lars Vesterdal, Dawid Zielínski, and Markus Fischer
Evolution
New tyrannosaur from the mid-Cretaceous of Uzbekistan clarifies evolution of giant body sizes and advanced senses in tyrant dinosaurs
Stephen L. Brusatte, Alexander Averianov, Hans-Dieter Sues, Amy Muir, and Ian B. Butler
Small genome of the fungus Escovopsis weberi, a specialized disease agent of ant agriculture
Tom J. B. de Man, Jason E. Stajich, Christian P. Kubicek, Clotilde Teiling, Komal Chenthamara, Lea Atanasova, Irina S. Druzhinina, Natasha Levenkova, Stephanie S. L. Birnbaum, Seth M. Barribeau, Brooke A. Bozick, Garret Suen, Cameron R. Currie, and Nicole M. Gerardo
Protein networks identify novel symbiogenetic genes resulting from plastid endosymbiosis Open Access Article From the Cover
Raphaël Méheust, Ehud Zelzion, Debashish Bhattacharya, Philippe Lopez, and Eric Bapteste
Inbreeding depression across the lifespan in a wild mammal population Open Access Article
Jisca Huisman, Loeske E. B. Kruuk, Philip A. Ellis, Tim Clutton-Brock, and Josephine M. Pemberton
Genetics
Immunology and Inflammation
Detection, phenotyping, and quantification of antigen-specific T cells using a peptide-MHC dodecamer
Jun Huang, Xun Zeng, Natalia Sigal, Peder J. Lund, Laura F. Su, Huang Huang, Yueh-hsiu Chien, and Mark M. Davis
Medical Sciences
Soluble (pro)renin receptor via β-catenin enhances urine concentration capability as a target of liver X receptor
Xiaohan Lu, Fei Wang, Chuanming Xu, Sunny Soodvilai, Kexin Peng, Jiahui Su, Long Zhao, Kevin T. Yang, Yumei Feng, Shu-Feng Zhou, Jan-Åke Gustafsson, and Tianxin Yang
Disrupted iron homeostasis causes dopaminergic neurodegeneration in mice Open Access Article Inaugural Article
Pavle Matak, Andrija Matak, Sarah Moustafa, Dipendra K. Aryal, Eric J. Benner, William Wetsel, and Nancy C. Andrews
Functional polymorphisms of macrophage migration inhibitory factor as predictors of morbidity and mortality of pneumococcal meningitis
Athina Savva, Matthijs C. Brouwer, Thierry Roger, Mercedes Valls Serón, Didier Le Roy, Bart Ferwerda, Arie van der Ende, Pierre-Yves Bochud, Diederik van de Beek, and Thierry Calandra
Exploring the surfaceome of Ewing sarcoma identifies a new and unique therapeutic target
Jennifer Town, Helio Pais, Sally Harrison, Lucy F. Stead, Carole Bataille, Wilawan Bunjobpol, Jing Zhang, and Terence H. Rabbitts
Microbiology
Viral serine palmitoyltransferase induces metabolic switch in sphingolipid biosynthesis and is required for infection of a marine alga
Carmit Ziv, Sergey Malitsky, Alaa Othman, Shifra Ben-Dor, Yu Wei, Shuning Zheng, Asaph Aharoni, Thorsten Hornemann, and Assaf Vardi
Diverse high-torque bacterial flagellar motors assemble wider stator rings using a conserved protein scaffold Open Access Article
Morgan Beeby, Deborah A. Ribardo, Caitlin A. Brennan, Edward G. Ruby, Grant J. Jensen, and David R. Hendrixson
Recombinant thiopeptides containing noncanonical amino acids
Xiaozhou Luo, Claudio Zambaldo, Tao Liu, Yuhan Zhang, Weimin Xuan, Chen Wang, Sean A. Reed, Peng-Yu Yang, Rongsheng E. Wang, Tsotne Javahishvili, Peter G. Schultz, and Travis S. Young
Human mesenchymal stromal cells reduce influenza A H5N1-associated acute lung injury in vitro and in vivo Open Access Article
Michael C. W. Chan, Denise I. T. Kuok, Connie Y. H. Leung, Kenrie P. Y. Hui, Sophie A. Valkenburg, Eric H. Y. Lau, John M. Nicholls, Xiaohui Fang, Yi Guan, Jae W. Lee, Renee W. Y. Chan, Robert G. Webster, Michael A. Matthay, and J. S. Malik Peiris
Insight into the flagella type III export revealed by the complex structure of the type III ATPase and its regulator
Katsumi Imada, Tohru Minamino, Yumiko Uchida, Miki Kinoshita, and Keiichi Namba
Human symbionts inject and neutralize antibacterial toxins to persist in the gut Open Access Article
Aaron G. Wexler, Yiqiao Bao, John C. Whitney, Louis-Marie Bobay, Joao B. Xavier, Whitman B. Schofield, Natasha A. Barry, Alistair B. Russell, Bao Q. Tran, Young Ah Goo, David R. Goodlett, Howard Ochman, Joseph D. Mougous, and Andrew L. Goodman
Neuroscience
Phasic, suprathreshold excitation and sustained inhibition underlie neuronal selectivity for short-duration sounds
Rishi K. Alluri, Gary J. Rose, Jessica L. Hanson, Christopher J. Leary, Gustavo A. Vasquez-Opazo, Jalina A. Graham, and Jeremy Wilkerson
Four-dimensional maps of the human somatosensory system Open Access Article
Pietro Avanzini, Rouhollah O. Abdollahi, Ivana Sartori, Fausto Caruana, Veronica Pelliccia, Giuseppe Casaceli, Roberto Mai, Giorgio Lo Russo, Giacomo Rizzolatti, and Guy A. Orban
New inducible genetic method reveals critical roles of GABA in the control of feeding and metabolism
Fantao Meng, Yong Han, Dollada Srisai, Valery Belakhov, Monica Farias, Yong Xu, Richard D. Palmiter, Timor Baasov, and Qi Wu
LSD1 modulates stress-evoked transcription of immediate early genes and emotional behavior Open Access Article
Francesco Rusconi, Barbara Grillo, Luisa Ponzoni, Silvia Bassani, Emanuela Toffolo, Leda Paganini, Alessandra Mallei, Daniela Braida, Maria Passafaro, Maurizio Popoli, Mariaelvina Sala, and Elena Battaglioli
Temporally chimeric mice reveal flexibility of circadian period-setting in the suprachiasmatic nucleus Open Access Article
Nicola J. Smyllie, Johanna E. Chesham, Ryan Hamnett, Elizabeth S. Maywood, and Michael H. Hastings
Pharmacology
Gene deficiency and pharmacological inhibition of soluble epoxide hydrolase confers resilience to repeated social defeat stress Open Access Article
Qian Ren, Min Ma, Tamaki Ishima, Christophe Morisseau, Jun Yang, Karen M. Wagner, Ji-chun Zhang, Chun Yang, Wei Yao, Chao Dong, Mei Han, Bruce D. Hammock, and Kenji Hashimoto
Truncated mu opioid GPCR variant involvement in opioid-dependent and opioid-independent pain modulatory systems within the CNS
Gina F. Marrone, Steven G. Grinnell, Zhigang Lu, Grace C. Rossi, Valerie Le Rouzic, Jin Xu, Susruta Majumdar, Ying-Xian Pan, and Gavril W. Pasternak
Identification and characterization of influenza variants resistant to a viral endonuclease inhibitor Open Access Article
Min-Suk Song, Gyanendra Kumar, William R. Shadrick, Wei Zhou, Trushar Jeevan, Zhenmei Li, P. Jake Slavish, Thomas P. Fabrizio, Sun-Woo Yoon, Thomas R. Webb, Richard J. Webby, and Stephen W. White
Physiology
Size and speed of the working stroke of cardiac myosin in situ
Marco Caremani, Francesca Pinzauti, Massimo Reconditi, Gabriella Piazzesi, Ger J. M. Stienen, Vincenzo Lombardi, and Marco Linari
Plant Biology
Carnosic acid biosynthesis elucidated by a synthetic biology platform
Codruta Ignea, Anastasia Athanasakoglou, Efstathia Ioannou, Panagiota Georgantea, Fotini A. Trikka, Sofia Loupassaki, Vassilios Roussis, Antonios M. Makris, and Sotirios C. Kampranis
Cytonuclear interactions affect adaptive traits of the annual plant Arabidopsis thaliana in the field Open Access Article
Fabrice Roux, Tristan Mary-Huard, Elise Barillot, Estelle Wenes, Lucy Botran, Stéphanie Durand, Romain Villoutreix, Marie-Laure Martin-Magniette, Christine Camilleri, and Françoise Budar
Psychological and Cognitive Sciences
Inability to suppress salient distractors predicts low visual working memory capacity From the Cover
John M. Gaspar, Gregory J. Christie, David J. Prime, Pierre Jolicœur, and John J. McDonald

Corrections (Online Only)
Cover

Open Access
From the Cover
Inaugural Article
Classic
Cozzarelli Prize Winner
Front Matter

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Copyright © 2016 by the National Academy of Sciences

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