Fwd: PNAS Table of Contents for 9 December 2014; Vol. 111, No. 49

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Proceedings of the National Academy of Sciences 9 December 2014; Vol. 111, No. 49 This Week in PNAS In This Issue News Feature News Feature: Animals that self-medicate  Joel Shurkin An in-depth look at trending science issues. Retrospective Gerry Neugebauer: Pioneer of infrared astronomy B. Thomas Soifer Commentaries Increased subtlety of transcription factor binding increases complexity of genome regulation Peter H. von Hippel Complexity from precipitation reactions Oliver Steinbock Innate sense of purpose for IKKβ Matthew S. Hayden and Sankar Ghosh MAGUKs end a tale of promiscuity Carsten Reissner and Markus Missler Bioalcohol production by a new synthetic route in a hyperthermophilic archaeon Volker Müller PNAS Plus Significance Statements PNAS Plus Significance Statements Brief statements written by the authors about the significance of their papers. Perspective Dealing with femtorisks in international relations Aaron Benjamin Frank, Margaret Goud Collins, Simon A. Levin, Andrew W. Lo, Joshua Ramo, Ulf Dieckmann, Victor Kremenyuk, Arkady Kryazhimskiy, JoAnne Linnerooth-Bayer, Ben Ramalingam, J. Stapleton Roy, Donald G. Saari, Stefan Thurner, and Detlof von Winterfeldt Physical Sciences Applied Physical Sciences Spiral precipitation patterns in confined chemical gardens  Florence Haudin, Julyan H. E. Cartwright, Fabian Brau, and A. De Wit Direct observation of prefreezing at the interface melt–solid in polymer crystallization  Ann-Kristin Löhmann, Thomas Henze, and Thomas Thurn-Albrecht Whole-cell, multicolor superresolution imaging using volumetric multifocus microscopy Bassam Hajj, Jan Wisniewski, Mohamed El Beheiry, Jiji Chen, Andrey Revyakin, Carl Wu, and Maxime Dahan Computer Sciences Body ownership causes illusory self-attribution of speaking and influences subsequent real speaking Domna Banakou and Mel Slater Earth, Atmospheric, and Planetary Sciences Elucidating severe urban haze formation in China  Song Guo, Min Hu, Misti L. Zamora, Jianfei Peng, Dongjie Shang, Jing Zheng, Zhuofei Du, Zhijun Wu, Min Shao, Limin Zeng, Mario J. Molina, and Renyi Zhang Global emissions of refrigerants HCFC-22 and HFC-134a: Unforeseen seasonal contributions Bin Xiang, Prabir K. Patra, Stephen A. Montzka, Scot M. Miller, James W. Elkins, Fred L. Moore, Elliot L. Atlas, Ben R. Miller, Ray F. Weiss, Ronald G. Prinn, and Steven C. Wofsy Engineering Silk-based resorbable electronic devices for remotely controlled therapy and in vivo infection abatement Hu Tao, Suk-Won Hwang, Benedetto Marelli, Bo An, Jodie E. Moreau, Miaomiao Yang, Mark A. Brenckle, Stanley Kim, David L. Kaplan, John A. Rogers, and Fiorenzo G. Omenetto Engineering the shape and structure of materials by fractal cut Yigil Cho, Joong-Ho Shin, Avelino Costa, Tae Ann Kim, Valentin Kunin, Ju Li, Su Yeon Lee, Shu Yang, Heung Nam Han, In-Suk Choi, and David J. Srolovitz In vivo treatment of Helicobacter pylori infection with liposomal linolenic acid reduces colonization and ameliorates inflammation Soracha Thamphiwatana, Weiwei Gao, Marygorret Obonyo, and Liangfang Zhang Environmental Sciences Impact of ocean phytoplankton diversity on phosphate uptake Michael W. Lomas, Juan A. Bonachela, Simon A. Levin, and Adam C. Martiny Critical slowing down as early warning for the onset of collapse in mutualistic communities Vasilis Dakos and Jordi Bascompte Physics A model for the generation and interconversion of ER morphologies Tom Shemesh, Robin W. Klemm, Fabian B. Romano, Songyu Wang, Joshua Vaughan, Xiaowei Zhuang, Hanna Tukachinsky, Michael M. Kozlov, and Tom A. Rapoport Modulation of DNA loop lifetimes by the free energy of loop formation Yi-Ju Chen, Stephanie Johnson, Peter Mulligan, Andrew J. Spakowitz, and Rob Phillips Anomalously large isotope effect in the glass transition of water  Catalin Gainaru, Alexander L. Agapov, Violeta Fuentes-Landete, Katrin Amann-Winkel, Helge Nelson, Karsten W. Köster, Alexander I. Kolesnikov, Vladimir N. Novikov, Ranko Richert, Roland Böhmer, Thomas Loerting, and Alexei P. Sokolov Optimal resource allocation in cellular sensing systems  Christopher C. Govern and Pieter Rein ten Wolde Statistics A general construction for parallelizing Metropolis−Hastings algorithms  Ben Calderhead Social Sciences Environmental Sciences Elucidating severe urban haze formation in China  Song Guo, Min Hu, Misti L. Zamora, Jianfei Peng, Dongjie Shang, Jing Zheng, Zhuofei Du, Zhijun Wu, Min Shao, Limin Zeng, Mario J. Molina, and Renyi Zhang Psychological and Cognitive Sciences Timing the impact of literacy on visual processing Felipe Pegado, Enio Comerlato, Fabricio Ventura, Antoinette Jobert, Kimihiro Nakamura, Marco Buiatti, Paulo Ventura, Ghislaine Dehaene-Lambertz, Régine Kolinsky, José Morais, Lucia W. Braga, Laurent Cohen, and Stanislas Dehaene Social Sciences Collapse of cooperation in evolving games Alexander J. Stewart and Joshua B. Plotkin Biological Sciences Anthropology Phylogenetic reconstruction of Bantu kinship challenges Main Sequence Theory of human social evolution  Christopher Opie, Susanne Shultz, Quentin D. Atkinson, Thomas Currie, and Ruth Mace Applied Biological Sciences Structure-guided U2AF65 variant improves recognition and splicing of a defective pre-mRNA Anant A. Agrawal, Krystle J. McLaughlin, Jermaine L. Jenkins, and Clara L. Kielkopf Osteoinductivity of engineered cartilaginous templates devitalized by inducible apoptosis Paul E. Bourgine, Celeste Scotti, Sebastien Pigeot, Laurent A. Tchang, Atanas Todorov, and Ivan Martin Biochemistry Protein kinase IKKβ-catalyzed phosphorylation of IRF5 at Ser462 induces its dimerization and nuclear translocation in myeloid cells  Marta Lopez-Pelaez, Douglas J. Lamont, Mark Peggie, Natalia Shpiro, Nathanael S. Gray, and Philip Cohen IKKβ is an IRF5 kinase that instigates inflammation   Junyao Ren, Xiang Chen, and Zhijian J. Chen Structure of Crumbs tail in complex with the PALS1 PDZ–SH3–GK tandem reveals a highly specific assembly mechanism for the apical Crumbs complex  Youjun Li, Zhiyi Wei, Yan Yan, Qingwen Wan, Quansheng Du, and Mingjie Zhang Catecholamine-induced lipolysis causes mTOR complex dissociation and inhibits glucose uptake in adipocytes Garrett R. Mullins, Lifu Wang, Vidisha Raje, Samantha G. Sherwood, Rebecca C. Grande, Salome Boroda, James M. Eaton, Sara Blancquaert, Pierre P. Roger, Norbert Leitinger, and Thurl E. Harris UbcH7 regulates 53BP1 stability and DSB repair Xiangzi Han, Lei Zhang, Jinsil Chung, Franklin Mayca Pozo, Amanda Tran, Darcie D. Seachrist, James W. Jacobberger, Ruth A. Keri, Hannah Gilmore, and Youwei Zhang Mechanism of ganciclovir-induced chain termination revealed by resistant viral polymerase mutants with reduced exonuclease activity Han Chen, G. Peter Beardsley, and Donald M. Coen Respiration triggers heme transfer from cytochrome c peroxidase to catalase in yeast mitochondria Meena Kathiresan, Dorival Martins, and Ann M. English Structural basis of collagen fiber degradation by cathepsin K  Adeleke H. Aguda, Preety Panwar, Xin Du, Nham T. Nguyen, Gary D. Brayer, and Dieter Brömme Biophysics and Computational Biology Modulation of DNA loop lifetimes by the free energy of loop formation Yi-Ju Chen, Stephanie Johnson, Peter Mulligan, Andrew J. Spakowitz, and Rob Phillips Whole-cell, multicolor superresolution imaging using volumetric multifocus microscopy Bassam Hajj, Jan Wisniewski, Mohamed El Beheiry, Jiji Chen, Andrey Revyakin, Carl Wu, and Maxime Dahan Optimal resource allocation in cellular sensing systems  Christopher C. Govern and Pieter Rein ten Wolde Trajectories of the ribosome as a Brownian nanomachine  Ali Dashti, Peter Schwander, Robert Langlois, Russell Fung, Wen Li, Ahmad Hosseinizadeh, Hstau Y. Liao, Jesper Pallesen, Gyanesh Sharma, Vera A. Stupina, Anne E. Simon, Jonathan D. Dinman, Joachim Frank, and Abbas Ourmazd Distinct roles of the photosystem II protein PsbS and zeaxanthin in the regulation of light harvesting in plants revealed by fluorescence lifetime snapshots  Emily J. Sylak-Glassman, Alizée Malnoë, Eleonora De Re, Matthew D. Brooks, Alexandra Lee Fischer, Krishna K. Niyogi, and Graham R. Fleming Rational design and synthesis of an orally bioavailable peptide guided by NMR amide temperature coefficients Conan K. Wang, Susan E. Northfield, Barbara Colless, Stephanie Chaousis, Ingrid Hamernig, Rink-Jan Lohman, Daniel S. Nielsen, Christina I. Schroeder, Spiros Liras, David A. Price, David P. Fairlie, and David J. Craik Electric fingerprint of voltage sensor domains Caio S. Souza, Cristiano Amaral, and Werner Treptow Electrostatic transition state stabilization rather than reactant destabilization provides the chemical basis for efficient chorismate mutase catalysis Daniel Burschowsky, André van Eerde, Mats Ökvist, Alexander Kienhöfer, Peter Kast, Donald Hilvert, and Ute Krengel Cell Biology A model for the generation and interconversion of ER morphologies Tom Shemesh, Robin W. Klemm, Fabian B. Romano, Songyu Wang, Joshua Vaughan, Xiaowei Zhuang, Hanna Tukachinsky, Michael M. Kozlov, and Tom A. Rapoport Actin stress in cell reprogramming Jun Guo, Yuexiu Wang, Frederick Sachs, and Fanjie Meng GABAρ subunits confer a bicuculline-insensitive component to GFAP+ cells of cerebellum Adriana Pétriz, Daniel Reyes-Haro, María Alejandra González-González, Ricardo Miledi, and Ataúlfo Martínez-Torres A mechanical-biochemical feedback loop regulates remodeling in the actin cytoskeleton Matthew R. Stachowiak, Mark A. Smith, Elizabeth Blankman, Laura M. Chapin, Hayri E. Balcioglu, Shuyuan Wang, Mary C. Beckerle, and Ben O'Shaughnessy Substrate recognition by the cell surface palmitoyl transferase DHHC5 Jacqueline Howie, Louise Reilly, Niall J. Fraser, Julia M. Vlachaki Walker, Krzysztof J. Wypijewski, Michael L. J. Ashford, Sarah C. Calaghan, Heather McClafferty, Lijun Tian, Michael J. Shipston, Andrii Boguslavskyi, Michael J. Shattock, and William Fuller Developmental Biology Wnts produced by Osterix-expressing osteolineage cells regulate their proliferation and differentiation  Si Hui Tan, Kshemendra Senarath-Yapa, Michael T. Chung, Michael T. Longaker, Joy Y. Wu, and Roeland Nusse Ecology Impact of ocean phytoplankton diversity on phosphate uptake Michael W. Lomas, Juan A. Bonachela, Simon A. Levin, and Adam C. Martiny Critical slowing down as early warning for the onset of collapse in mutualistic communities Vasilis Dakos and Jordi Bascompte Museum specimens reveal loss of pollen host plants as key factor driving wild bee decline in The Netherlands Jeroen Scheper, Menno Reemer, Ruud van Kats, Wim A. Ozinga, Giel T. J. van der Linden, Joop H. J. Schaminée, Henk Siepel, and David Kleijn Evolution Collapse of cooperation in evolving games Alexander J. Stewart and Joshua B. Plotkin Early Holocene chicken domestication in northern China  Hai Xiang, Jianqiang Gao, Baoquan Yu, Hui Zhou, Dawei Cai, Youwen Zhang, Xiaoyong Chen, Xi Wang, Michael Hofreiter, and Xingbo Zhao Genetics Measuring missing heritability: Inferring the contribution of common variants  David Golan, Eric S. Lander, and Saharon Rosset Deficiencies in tRNA synthetase editing activity cause cardioproteinopathy Ye Liu, Jakob S. Satz, My-Nuong Vo, Leslie A. Nangle, Paul Schimmel, and Susan L. Ackerman Immunology and Inflammation Molecular architecture of the αβ T cell receptor–CD3 complex Michael E. Birnbaum, Richard Berry, Yu-Shan Hsiao, Zhenjun Chen, Miguel A. Shingu-Vazquez, Xiaoling Yu, Deepa Waghray, Suzanne Fischer, James McCluskey, Jamie Rossjohn, Thomas Walz, and K. Christopher Garcia Acquisition of an immunosuppressive protumorigenic macrophage phenotype depending on c-Jun phosphorylation Simona Hefetz-Sela, Ilan Stein, Yair Klieger, Rinnat Porat, Moshe Sade-Feldman, Farid Zreik, Arnon Nagler, Orit Pappo, Luca Quagliata, Eva Dazert, Robert Eferl, Luigi Terracciano, Erwin F. Wagner, Yinon Ben-Neriah, Michal Baniyash, and Eli Pikarsky Actin polymerization as a key innate immune effector mechanism to control Salmonella infection Si Ming Man, Andrew Ekpenyong, Panagiotis Tourlomousis, Sarra Achouri, Eugenia Cammarota, Katherine Hughes, Alessandro Rizzo, Gilbert Ng, John A. Wright, Pietro Cicuta, Jochen R. Guck, and Clare E. Bryant Functionally distinct ERAP1 allotype combinations distinguish individuals with Ankylosing Spondylitis  Emma Reeves, Alexandra Colebatch-Bourn, Tim Elliott, Christopher J. Edwards, and Edward James Medical Sciences Disruption of FAT10–MAD2 binding inhibits tumor progression Steven Setiawan Theng, Wei Wang, Way-Champ Mah, Cheryl Chan, Jingli Zhuo, Yun Gao, Haina Qin, Liangzhong Lim, Samuel S. Chong, Jianxing Song, and Caroline G. Lee A calcium-dependent protease as a potential therapeutic target for Wolfram syndrome  Simin Lu, Kohsuke Kanekura, Takashi Hara, Jana Mahadevan, Larry D. Spears, Christine M. Oslowski, Rita Martinez, Mayu Yamazaki-Inoue, Masashi Toyoda, Amber Neilson, Patrick Blanner, Cris M. Brown, Clay F. Semenkovich, Bess A. Marshall, Tamara Hershey, Akihiro Umezawa, Peter A. Greer, and Fumihiko Urano Plasma DNA aberrations in systemic lupus erythematosus revealed by genomic and methylomic sequencing  Rebecca W. Y. Chan, Peiyong Jiang, Xianlu Peng, Lai-Shan Tam, Gary J. W. Liao, Edmund K. M. Li, Priscilla C. H. Wong, Hao Sun, K. C. Allen Chan, Rossa W. K. Chiu, and Y. M. Dennis Lo In vivo treatment of Helicobacter pylori infection with liposomal linolenic acid reduces colonization and ameliorates inflammation Soracha Thamphiwatana, Weiwei Gao, Marygorret Obonyo, and Liangfang Zhang MACROD2 overexpression mediates estrogen independent growth and tamoxifen resistance in breast cancers Morassa Mohseni, Justin Cidado, Sarah Croessmann, Karen Cravero, Ashley Cimino-Mathews, Hong Yuen Wong, Rob Scharpf, Daniel J. Zabransky, Abde M. Abukhdeir, Joseph P. Garay, Grace M. Wang, Julia A. Beaver, Rory L. Cochran, Brian G. Blair, D. Marc Rosen, Bracha Erlanger, Pedram Argani, Paula J. Hurley, Josh Lauring, and Ben Ho Park Young capillary vessels rejuvenate aged pancreatic islets Joana Almaça, Judith Molina, Rafael Arrojo e Drigo, Midhat H. Abdulreda, Won Bae Jeon, Per-Olof Berggren, Alejandro Caicedo, and Hong Gil Nam Microbiology The cholesterol-dependent cytolysins pneumolysin and streptolysin O require binding to red blood cell glycans for hemolytic activity  Lucy K. Shewell, Richard M. Harvey, Melanie A. Higgins, Christopher J. Day, Lauren E. Hartley-Tassell, Austen Y. Chen, Christine M. Gillen, David B. A. James, Francis Alonzo III, Victor J. Torres, Mark J. Walker, Adrienne W. Paton, James C. Paton, and Michael P. Jennings Single gene insertion drives bioalcohol production by a thermophilic archaeon  Mirko Basen, Gerrit J. Schut, Diep M. Nguyen, Gina L. Lipscomb, Robert A. Benn, Cameron J. Prybol, Brian J. Vaccaro, Farris L. Poole II, Robert M. Kelly, and Michael W. W. Adams Recombinant HIV envelope trimer selects for quaternary-dependent antibodies targeting the trimer apex Devin Sok, Marit J. van Gils, Matthias Pauthner, Jean-Philippe Julien, Karen L. Saye-Francisco, Jessica Hsueh, Bryan Briney, Jeong Hyun Lee, Khoa M. Le, Peter S. Lee, Yuanzi Hua, Michael S. Seaman, John P. Moore, Andrew B. Ward, Ian A. Wilson, Rogier W. Sanders, and Dennis R. Burton Neuroscience Timing the impact of literacy on visual processing Felipe Pegado, Enio Comerlato, Fabricio Ventura, Antoinette Jobert, Kimihiro Nakamura, Marco Buiatti, Paulo Ventura, Ghislaine Dehaene-Lambertz, Régine Kolinsky, José Morais, Lucia W. Braga, Laurent Cohen, and Stanislas Dehaene Network dynamics of the brain and influence of the epileptic seizure onset zone Samuel P. Burns, Sabato Santaniello, Robert B. Yaffe, Christophe C. Jouny, Nathan E. Crone, Gregory K. Bergey, William S. Anderson, and Sridevi V. Sarma Brain–machine interface for eye movements Arnulf B. A. Graf and Richard A. Andersen Nitric oxide regulates synaptic transmission between spiny projection neurons Yotam Sagi, Myriam Heiman, Jayms D. Peterson, Sergei Musatov, Michael G. Kaplitt, Dalton J. Surmeier, Nathaniel Heintz, and Paul Greengard Modeling local and cross-species neuron number variations in the cerebral cortex as arising from a common mechanism Diarmuid J. Cahalane, Christine J. Charvet, and Barbara L. Finlay A common brain network links development, aging, and vulnerability to disease  Gwenaëlle Douaud, Adrian R. Groves, Christian K. Tamnes, Lars Tjelta Westlye, Eugene P. Duff, Andreas Engvig, Kristine B. Walhovd, Anthony James, Achim Gass, Andreas U. Monsch, Paul M. Matthews, Anders M. Fjell, Stephen M. Smith, and Heidi Johansen-Berg Elevated hippocampal resting-state connectivity underlies deficient neurocognitive function in aging  Alireza Salami, Sara Pudas, and Lars Nyberg Physiology Functional differences between neurotransmitter binding sites of muscle acetylcholine receptors Tapan K. Nayak, Iva Bruhova, Srirupa Chakraborty, Shaweta Gupta, Wenjun Zheng, and Anthony Auerbach Plant Biology SNF2 chromatin remodeler-family proteins FRG1 and -2 are required for RNA-directed DNA methylation  Martin Groth, Hume Stroud, Suhua Feng, Maxim V. C. Greenberg, Ajay A. Vashisht, James A. Wohlschlegel, Steven E. Jacobsen, and Israel Ausin Distinct roles of FKF1, GIGANTEA, and ZEITLUPE proteins in the regulation of CONSTANS stability in Arabidopsis photoperiodic flowering Young Hun Song, Daniel A. Estrada, Richard S. Johnson, Somi K. Kim, Sang Yeol Lee, Michael J. MacCoss, and Takato Imaizumi Psychological and Cognitive Sciences Body ownership causes illusory self-attribution of speaking and influences subsequent real speaking Domna Banakou and Mel Slater Corrections Correction for Abedini et al., Cell fate regulation by gelsolin in human gynecologic cancers Correction for Gao et al., Evidence for multiple roles for grainyheadlike 2 in the establishment and maintenance of human mucociliary airway epithelium Correction for Reich et al., Biogeographic variation in evergreen conifer needle longevity and impacts on boreal forest carbon cycle projections Open Access From the Cover Inaugural Article Classic Cozzarelli Prize Winner Front Matter This message was sent to pascal.alter@gmail.com. (.......) Or by mail: Customer Service * 425 Broadway St * Redwood City, CA 94063 * U.S.A. Copyright © 2014 by the National Academy of Sciences